Time-Resolved Fluorescence Wiki - software

easytau

Anonymous (anonymous@undisclosed.example.com) — 2016-03-01T09:41:03+00:00

2016/03/01 09:39		current
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	The easiest way to start with scripting measurements in EasyTau is to acquire a measurement with a wizard and then create a script from this measurement.		The easiest way to start with scripting measurements in EasyTau is to acquire a measurement with a wizard and then create a script from this measurement.

-	- Create a data set using a wizard of your choice	+	* Create a data set using a wizard of your choice
-	- Right click on the data set	+	* Right click on the data set
-	- Select ''Transfer script to customised mode, script page''	+	* Select ''Transfer script to customised mode, script page''
	{{ :software:create_script.png?600 \|}}		{{ :software:create_script.png?600 \|}}
		+	* Adjust to your liking
		+
		+

fcs_viewer

Anonymous (anonymous@undisclosed.example.com) — 2015-02-25T16:51:37+00:00

2014/05/22 20:57		current
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		+	{{tag>software analysis FCS open_source}}
		+
	====== FCS viewer: FCS data visualizer for PicoQuant data format ======		====== FCS viewer: FCS data visualizer for PicoQuant data format ======


-	[[https://github.com/dwaithe/FCS_viewer]]	+	[[https://github.com/paulmueller/FCS_viewer]]

	Contains a port of the PicoQuant Matlab demo code to Python.		Contains a port of the PicoQuant Matlab demo code to Python.

flimfit

Anonymous (anonymous@undisclosed.example.com) — 2014-05-23T09:04:11+00:00

2014/05/23 09:02		current
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		+	{{tag> software analysis FLIM open_source}}
		+
	====== FLIMfit ======		====== FLIMfit ======

fluofit

Anonymous (anonymous@undisclosed.example.com) — 2015-11-03T14:07:12+00:00

2026/04/11 09:54	current
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	+	====== FluoFit ======
	+	The FluoFit software package is a powerful global analysis software for fluorescence decay and anisotropy measurements. Tail fitting as well as a numerical reconvolution algorithm to account for the finite Instrument Response Function ([[glossary:IRF]]) can be applied. The FluoFit software is available in two versions (Basic and Professional) with different functionalities to meet individual needs.

	+	see [[https://www.picoquant.com/products/category/software/fluofit-global-fluorescence-decay-data-analysis-software]]

pycorrfit

Anonymous (anonymous@undisclosed.example.com) — 2016-03-07T11:00:06+00:00

2015/11/03 13:58		current
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	"[...] PyCorrFit is a general-purpose FCS evaluation software that, amongst other formats, supports the established Zeiss ConfoCor3 ~.fcs file format. PyCorrFit comes with several built-in model functions, covering a wide range of applications in standard confocal FCS. In addition, it contains equations dealing with different excitation geometries like total internal reflection (TIR)."		"[...] PyCorrFit is a general-purpose FCS evaluation software that, amongst other formats, supports the established Zeiss ConfoCor3 ~.fcs file format. PyCorrFit comes with several built-in model functions, covering a wide range of applications in standard confocal FCS. In addition, it contains equations dealing with different excitation geometries like total internal reflection (TIR)."

-	[[http://paulmueller.github.io/PyCorrFit/]]	+	[[http://pycorrfit.craban.de/]]

	GitHub:[[https://github.com/paulmueller/PyCorrFit]]		GitHub:[[https://github.com/paulmueller/PyCorrFit]]

-	PyCorrFit does support the PicoQuant t3r file format (currently only '''*.pt3''') [[https://github.com/paulmueller/PyCorrFit/issues/69]]	+	PyCorrFit does support the PicoQuant t3r file format (currently only '''*.pt3''') [[https://github.com/paulmueller/PyCorrFit/issues/69]] \\
	An enhancement request for implementing '''*.ptu''' file format support is existing. [[https://github.com/paulmueller/PyCorrFit/issues/84]]		An enhancement request for implementing '''*.ptu''' file format support is existing. [[https://github.com/paulmueller/PyCorrFit/issues/84]]

	PyCorrFit is described in:		PyCorrFit is described in:
	Müller, P., Schwille, P., and Weidemann, T. PyCorrFit - generic data evaluation for fluorescence correlation spectroscopy. Bioinformatics 2014. [[http://dx.doi.org/10.1093/bioinformatics/btu328]]		Müller, P., Schwille, P., and Weidemann, T. PyCorrFit - generic data evaluation for fluorescence correlation spectroscopy. Bioinformatics 2014. [[http://dx.doi.org/10.1093/bioinformatics/btu328]]

supported_mt200_pc_configuration_for_symphotime_32

Anonymous (anonymous@undisclosed.example.com) — 2016-08-25T11:24:41+00:00

2015/10/28 09:36		current
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-	{{tag> SymPhoTime MT200 MicroTime SPT32}}	+	{{tag> SymPhoTime MT200 MicroTime SPT32 PC}}
	~~TOC~~		~~TOC~~

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	===== Windows 7 (64bit) =====		===== Windows 7 (64bit) =====
-	* not data available yet	+	* not supported for controlling the MicroTime200
	not supported:		not supported:
	* DataTranslation PCI framegrabber - no driver available for 64 bit systems - cannot work neither within nor outside SymPhoTime64 software		* DataTranslation PCI framegrabber - no driver available for 64 bit systems - cannot work neither within nor outside SymPhoTime64 software
		+	* Supported for the "Analysis Mode"

	===== Windows 7 (32bit) =====		===== Windows 7 (32bit) =====

supported_mt200_pc_configuration_for_symphotime_64

Anonymous (anonymous@undisclosed.example.com) — 2023-02-17T12:44:38+00:00

2023/02/17 12:40		current
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-	{{tag>SymPhoTime MT200 MicroTime Scanner PI Physik_Instrumente E725 E710 MadCityLabs Mad_City_Labs PC}}	+	{{tag>SymPhoTime MicroTime200 Scanner PI Physik_Instrumente E725 E710 MadCityLabs Mad_City_Labs PC}}
	~~TOC~~		~~TOC~~

symphotime_32

Anonymous (anonymous@undisclosed.example.com) — 2015-02-10T16:47:15+00:00

2026/04/11 09:54	current
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	+	====== SymPhoTime 32 ======
	+	SymPhoTime 32 is the name of the now obsolete software package for data acquisition and analysis using PicoQuant's time-resolved confocal microscope [[products:MicroTime 200]], [[products:LSM upgrade kits]] or [[products:TCSPC electronics]].

	+	SymPhoTime has been replace by the 64bit version called [[software:SymPhoTime64]]

symphotime

Anonymous (anonymous@undisclosed.example.com) — 2015-02-10T16:32:55+00:00

2026/04/11 09:54	current
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	+	====== SymPhoTime ======

	+	The SymPhoTime software package is an integrated solution for data acquisition and analysis using PicoQuant's time-resolved confocal microscope MicroTime 200, LSM upgrade kits or TCSPC electronics.
	+
	+	After several very successful years [[software:SymPhoTime32]] has been replaced by the completely rewritten 64bit version [[software:SymPhoTime64]].

symphotime64

Anonymous (anonymous@undisclosed.example.com) — 2015-01-22T14:39:59+00:00

2014/05/23 07:33		current
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-	The [[http://www.picoquant.com\|PicoQuant]] SymPhoTime 64 software package is an integrated solution for data acquisition and analysis using PicoQuant's time-resolved confocal microscope MicroTime 200, LSM upgrade kits or [[glossary:TCSPC]] electronics. Its clearly structured layout and powerful analysis routines allows the user to focus on the results rather than on the data processing. The software is designed for a 64 bit operation system and features a graphical user interface (GUI), which guides the user through all necessary steps for an individual analysis or measurement process. Data dependencies are directly visible in the underlying workspace concept. An integrated scripting language ("STUPSLANG") even puts the user in a position to freely add new analysis procedures or customize existing ones.	+	The [[http://www.picoquant.com\|PicoQuant]] SymPhoTime 64 software package is an integrated solution for data acquisition and analysis using PicoQuant's time-resolved confocal microscope [[products:MicroTime]], LSM upgrade kits or [[glossary:TCSPC]] electronics. Its clearly structured layout and powerful analysis routines allows the user to focus on the results rather than on the data processing. The software is designed for a 64 bit operation system and features a graphical user interface (GUI), which guides the user through all necessary steps for an individual analysis or measurement process. Data dependencies are directly visible in the underlying workspace concept. An integrated scripting language ("STUPSLANG") even puts the user in a position to freely add new analysis procedures or customize existing ones.

	For more information, latest version and download link see [[http://www.picoquant.com/products/category/software/symphotime-64-fluorescence-lifetime-imaging-and-correlation-software\|SymPhoTime64]].		For more information, latest version and download link see [[http://www.picoquant.com/products/category/software/symphotime-64-fluorescence-lifetime-imaging-and-correlation-software\|SymPhoTime64]].