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| software [2021/08/25 07:47] – [Data Analysis] admin | software [2022/10/14 08:19] – admin |
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| * [[software:PyCorrFit]] is a general-purpose FCS evaluation software that, amongst other formats, supports the established Zeiss ConfoCor3 ~.fcs file format. PyCorrFit comes with several built-in model functions, covering a wide range of applications in standard confocal FCS. In addition, it contains equations dealing with different excitation geometries like total internal reflection (TIR). | * [[software:PyCorrFit]] is a general-purpose FCS evaluation software that, amongst other formats, supports the established Zeiss ConfoCor3 ~.fcs file format. PyCorrFit comes with several built-in model functions, covering a wide range of applications in standard confocal FCS. In addition, it contains equations dealing with different excitation geometries like total internal reflection (TIR). |
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| | ** [[https://github.com/khemmen/katcorr/]] The katcorr is a collection of scripts and correlators that are inspired by the paper Ries...Schwille 2010 Optics Express "Automated suppression of sample-related artifacts in FCS". |
| | These scripts have different scopes and use the library [[https://github.com/Fluorescence-Tools/tttrlib|tttrlib]] to read and correlate time-tagged time resolved (TTTR) files. |
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| * [[http://flim-analyzer.ip-korea.org/|FLIM-FRET analyzer]]: open source software for automation of lifetime-based FRET analysis. This is a Microsoft Windows application originally developed in C#. The main goal of this application is to provide the FLIM community a user-friendly application. | * [[http://flim-analyzer.ip-korea.org/|FLIM-FRET analyzer]]: open source software for automation of lifetime-based FRET analysis. This is a Microsoft Windows application originally developed in C#. The main goal of this application is to provide the FLIM community a user-friendly application. |
| /* * [[software:FCS viewer]] ..This became redundant as its developer released Pycorrfit*/ | /* * [[software:FCS viewer]] ..This became redundant as its developer released Pycorrfit*/ |
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| * [[https://github.com/dwaithe/FCS_point_correlator| FCS Point Correlator]] FCS Bulk Correlation Software accepting pt3 and ptu files. | * [[https://github.com/dwaithe/FCS_point_correlator| FCS Point Correlator]] FCS Bulk Correlation Software accepting pt3 and ptu files. for fitting see https://dwaithe.github.io/FCSfitJS/ |
| | [[https://dwaithe.github.io/FCSfitJS/| FCS fit JS]] |
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| * [[software:FLIMFit]]. FLIMfit is an open source package for rapid analysis of large FLIM datasets. | * [[software:FLIMFit]]. FLIMfit is an open source package for rapid analysis of large FLIM datasets. |
